Allahabad High Court Waives Penalty Where GST Paid Under Wrong Head

IGST wrongly deposited as CGST and SGST cannot attract penalty when tax already with department

Allahabad HC: No Penalty When GST Paid Under Wrong Head

Meetu Kumari | Feb 11, 2026 |

Allahabad High Court Waives Penalty Where GST Paid Under Wrong Head

Allahabad High Court Waives Penalty Where GST Paid Under Wrong Head

The petitioner, Siddiqui Transport Company through its proprietor Mr. Vanshi Dhar Gairola, challenged the order dated 25.04.2024 passed by the adjudicating authority and the appellate order dated 30.11.2024 affirming the same. The dispute arose after a show cause notice dated 23.12.2023 demanded tax of Rs. 1,42,495/-. The petitioner maintained that the tax amount had already been deposited; however, by mistake, the IGST liability was paid under the heads of CGST and SGST. It was also pointed out that the total amount deposited exceeded the demanded sum by Rs. 1,048/-.

The department did not dispute that the amount stood deposited, but contended that it had been paid under the wrong tax head. Despite this, penalty was imposed on the ground of non-payment of IGST.

Issue before HC: Whether penalty and demand can be sustained when a tax liability has been discharged but mistakenly deposited under an incorrect GST head.

HC’s Ruling: The High Court held that the issue was squarely covered by the earlier ruling in Ocean E Mart. Since the tax amount had already been deposited with the department the same could not be treated as deliberate non-payment or tax evasion.

The Court permitted the petitioner to deposit the amount under the correct IGST head within ten days. The authorities were directed to refund the amount earlier deposited under CGST and SGST within a further period of ten days, in accordance with law. The Court further clarified that as the mistake was not mala fide and the tax amount was already with the department, the petitioner would not be liable to pay any interest or penalty. Therefore, the impugned orders were set aside.

To Read Full Judgment, Download PDF Given Below

StudyCafe Membership

Join StudyCafe Membership. For More details about Membership Click Join Membership Button
Join Membership

In case of any Doubt regarding Membership you can mail us at [email protected]

Join Studycafe's WhatsApp Group or Telegram Channel for Latest Updates on Government Job, Sarkari Naukri, Private Jobs, Income Tax, GST, Companies Act, Judgements and CA, CS, ICWA, and MUCH MORE!"




Author Bio
My Recent Articles
Allahabad High Court Waives Penalty Where GST Paid Under Wrong Head High Court Sets Aside GST Registration Cancellation for Lack of Reasons and Hearing Apex Court Sets Aside Gujarat HC Direction to Modify Income Tax Software in TDS Mismatch Cases ICAI Disciplinary Committee Finds Concurrent Auditors Guilty for Failure to Detect LC Fraud  Commission earned from Indian accommodation providers not Taxable in India in absense of PE: ITATView All Posts